Leveraging LLMs for Healthcare Data Interoperability and Fairness

The recent developments in the biomedical and healthcare research domain have seen a significant shift towards leveraging large language models (LLMs) to address various challenges, particularly in data interoperability, fairness, and automation of complex tasks. A notable trend is the integration of social determinants of health (SDoH) into knowledge graphs, which aims to mitigate biases and improve fairness in healthcare predictions. Additionally, there is a growing interest in using synthetic data and rephrased electronic health records (EHRs) for pretraining clinical language models, addressing privacy concerns while enhancing model performance. The field is also witnessing advancements in the extraction and synthesis of medical knowledge using LLMs, with a focus on improving evidence synthesis and data extraction from biomedical documents. Furthermore, there is a push towards developing compact LLM frameworks for local, high-privacy EHR data applications, which aim to balance performance with privacy and computational constraints. These developments collectively highlight the potential of LLMs to revolutionize healthcare by improving data accessibility, reducing biases, and automating complex clinical tasks.

Noteworthy papers include 'Integrating Social Determinants of Health into Knowledge Graphs: Evaluating Prediction Bias and Fairness in Healthcare,' which introduces a novel fairness formulation for graph embeddings, and 'Rephrasing Electronic Health Records for Pretraining Clinical Language Models,' which demonstrates the potential of synthetic clinical text to improve language modeling and downstream tasks.

Sources

Measuring Risk of Bias in Biomedical Reports: The RoBBR Benchmark

Rephrasing Electronic Health Records for Pretraining Clinical Language Models

Extracting Information in a Low-resource Setting: Case Study on Bioinformatics Workflows

MIMDE: Exploring the Use of Synthetic vs Human Data for Evaluating Multi-Insight Multi-Document Extraction Tasks

Integrating Social Determinants of Health into Knowledge Graphs: Evaluating Prediction Bias and Fairness in Healthcare

Few-Shot Domain Adaptation for Named-Entity Recognition via Joint Constrained k-Means and Subspace Selection

Unveiling Performance Challenges of Large Language Models in Low-Resource Healthcare: A Demographic Fairness Perspective

CDEMapper: Enhancing NIH Common Data Element Normalization using Large Language Models

Fairness at Every Intersection: Uncovering and Mitigating Intersectional Biases in Multimodal Clinical Predictions

Exploring Long-Term Prediction of Type 2 Diabetes Microvascular Complications

Medchain: Bridging the Gap Between LLM Agents and Clinical Practice through Interactive Sequential Benchmarking

The use of large language models to enhance cancer clinical trial educational materials

LLMs4Life: Large Language Models for Ontology Learning in Life Sciences

BANER: Boundary-Aware LLMs for Few-Shot Named Entity Recognition

Step-by-Step Guidance to Differential Anemia Diagnosis with Real-World Data and Deep Reinforcement Learning

GerPS-Compare: Comparing NER methods for legal norm analysis

A Novel Compact LLM Framework for Local, High-Privacy EHR Data Applications

Automatic detection of diseases in Spanish clinical notes combining medical language models and ontologies

A Review on Scientific Knowledge Extraction using Large Language Models in Biomedical Sciences

Automated Medical Report Generation for ECG Data: Bridging Medical Text and Signal Processing with Deep Learning

CLINICSUM: Utilizing Language Models for Generating Clinical Summaries from Patient-Doctor Conversations

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